Ligand validation:8YPZ

HSX: 5-O-phosphono-alpha-D-ribofuranose

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
8YPZ_HSX_F_3002	18%	31%	0.14	0.773	1.06	1.66	-	4	1	0	100%	1
8YPZ_HSX_C_1002	9%	11%	0.165	0.727	2	2.12	3	3	9	0	100%	1
8YPZ_HSX_E_1002	5%	6%	0.183	0.698	1.34	3.59	1	8	1	0	100%	1
8YPZ_HSX_B_1002	4%	15%	0.192	0.683	1.75	1.95	4	6	0	0	100%	1
8YPZ_HSX_A_1002	3%	28%	0.195	0.651	1.42	1.51	2	3	1	0	100%	1
5VN4_HSX_A_302	98%	57%	0.032	0.992	0.73	0.74	-	-	0	0	100%	1
8YQ0_HSX_O_1001	94%	51%	0.042	0.982	0.77	0.97	-	1	4	0	100%	1
1ZN7_HSX_A_506	89%	50%	0.051	0.974	0.82	0.97	-	1	2	0	100%	0.5
9MF6_HSX_C_501	86%	69%	0.054	0.968	0.48	0.54	-	-	0	0	100%	1
9DT7_HSX_B_302	83%	62%	0.063	0.971	0.48	0.79	-	1	0	0	100%	0.65

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.