PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 8GVM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8GVM_PGV_C_304 | 80% | 48% | 0.127 | 0.975 | 0.87 | 1.13 | 3 | 7 | 1 | 0 | 100% | 1 |
| 8GVM_PGV_A_608 | 76% | 49% | 0.137 | 0.973 | 1.03 | 0.93 | 3 | 3 | 2 | 0 | 100% | 1 |
| 8GVM_PGV_P_303 | 75% | 54% | 0.144 | 0.979 | 0.7 | 1.08 | 2 | 5 | 1 | 0 | 100% | 1 |
| 8GVM_PGV_N_609 | 74% | 40% | 0.136 | 0.966 | 0.94 | 1.38 | 3 | 7 | 1 | 0 | 100% | 1 |
| 8GVM_PGV_A_609 | 22% | 28% | 0.251 | 0.867 | 1.25 | 1.64 | 4 | 10 | 2 | 0 | 100% | 1 |
| 8GVM_PGV_C_308 | 14% | 35% | 0.212 | 0.765 | 1.22 | 1.33 | 3 | 4 | 0 | 0 | 96% | 0.9608 |
| 8GVM_PGV_G_104 | 12% | 33% | 0.273 | 0.801 | 1.08 | 1.54 | 2 | 10 | 1 | 0 | 100% | 1 |
| 8GVM_PGV_N_619 | 9% | 42% | 0.327 | 0.822 | 1.04 | 1.22 | 2 | 6 | 4 | 0 | 100% | 1 |
| 5B1A_PGV_P_303 | 98% | 35% | 0.064 | 0.985 | 1.06 | 1.51 | 3 | 13 | 4 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 95% | 52% | 0.078 | 0.981 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 7COH_PGV_C_267 | 93% | 49% | 0.087 | 0.983 | 0.87 | 1.09 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5ZCQ_PGV_N_608 | 90% | 32% | 0.094 | 0.978 | 1.15 | 1.53 | 5 | 8 | 1 | 0 | 100% | 1 |
