PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 8GVM designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8GVM_PGV_P_303 | 70% | 50% | 0.1 | 0.971 | 0.7 | 1.08 | 2 | 5 | 2 | 0 | 100% | 1 |
| 8GVM_PGV_A_608 | 68% | 47% | 0.104 | 0.967 | 1.03 | 0.93 | 3 | 3 | 2 | 0 | 100% | 1 |
| 8GVM_PGV_C_304 | 63% | 46% | 0.114 | 0.963 | 0.87 | 1.13 | 3 | 7 | 2 | 0 | 100% | 1 |
| 8GVM_PGV_N_609 | 62% | 39% | 0.114 | 0.956 | 0.94 | 1.38 | 3 | 7 | 3 | 0 | 100% | 1 |
| 8GVM_PGV_N_619 | 8% | 40% | 0.227 | 0.815 | 1.04 | 1.22 | 2 | 6 | 10 | 0 | 100% | 1 |
| 8GVM_PGV_A_609 | 7% | 28% | 0.23 | 0.808 | 1.25 | 1.64 | 4 | 10 | 6 | 0 | 100% | 1 |
| 8GVM_PGV_C_308 | 5% | 35% | 0.238 | 0.793 | 1.22 | 1.33 | 3 | 4 | 4 | 0 | 96% | 1 |
| 8GVM_PGV_G_104 | 5% | 33% | 0.238 | 0.774 | 1.08 | 1.54 | 2 | 10 | 7 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 93% | 49% | 0.047 | 0.982 | 0.92 | 0.94 | 2 | 5 | 0 | 0 | 100% | 1 |
| 6NKN_PGV_A_607 | 93% | 41% | 0.046 | 0.98 | 0.85 | 1.36 | 2 | 5 | 0 | 0 | 100% | 1 |
| 3ASN_PGV_A_522 | 87% | 45% | 0.061 | 0.977 | 0.86 | 1.18 | 2 | 2 | 1 | 0 | 100% | 1 |
| 6NMF_PGV_A_606 | 87% | 49% | 0.061 | 0.975 | 0.93 | 0.92 | 2 | 3 | 0 | 0 | 100% | 1 |
| 9IKG_PGV_A_614 | 83% | 49% | 0.073 | 0.982 | 0.75 | 1.07 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5X1F_PGV_A_608 | 82% | 39% | 0.074 | 0.977 | 0.89 | 1.43 | 3 | 7 | 0 | 0 | 100% | 1 |














