UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 8ZLY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8ZLY_UDP_D_604 | 91% | 28% | 0.083 | 0.971 | 1.16 | 1.71 | 2 | 8 | 0 | 0 | 100% | 1 |
| 8ZLY_UDP_A_604 | 90% | 18% | 0.101 | 0.985 | 1.74 | 1.77 | 2 | 9 | 0 | 0 | 100% | 1 |
| 8ZLY_UDP_G_604 | 90% | 19% | 0.102 | 0.985 | 1.4 | 2.01 | 2 | 10 | 0 | 0 | 100% | 1 |
| 8ZLY_UDP_C_604 | 89% | 28% | 0.109 | 0.987 | 1.11 | 1.75 | 1 | 6 | 0 | 0 | 100% | 1 |
| 8ZLY_UDP_E_604 | 88% | 25% | 0.104 | 0.98 | 1.2 | 1.83 | 2 | 7 | 1 | 0 | 100% | 1 |
| 8ZLY_UDP_B_604 | 87% | 28% | 0.083 | 0.956 | 1.12 | 1.75 | 2 | 8 | 0 | 0 | 100% | 1 |
| 8ZLY_UDP_F_604 | 84% | 25% | 0.119 | 0.983 | 1.09 | 1.95 | 1 | 7 | 1 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
