UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 8YH1 designated by the Author
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8YH1_UDP_A_302 | 64% | 51% | 0.099 | 0.942 | 1.1 | 0.68 | 1 | 1 | 1 | 0 | 100% | 1 |
| 8YH1_UDP_I_301 | 40% | 62% | 0.149 | 0.909 | 0.63 | 0.63 | 1 | 1 | 3 | 0 | 100% | 0.81 |
| 8YH1_UDP_C_302 | 25% | 71% | 0.177 | 0.879 | 0.49 | 0.47 | - | - | 1 | 0 | 100% | 0.83 |
| 8YH1_UDP_B_302 | 16% | 71% | 0.212 | 0.873 | 0.49 | 0.47 | - | - | 4 | 0 | 100% | 0.77 |
| 8YH1_UDP_D_302 | 2% | 65% | 0.327 | 0.794 | 0.53 | 0.63 | - | - | 3 | 0 | 100% | 0.74 |
| 5F87_UDP_A_501 | 100% | 31% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 68% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |














