Ligand validation:8Y25

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
8Y25_GOL_D_301	50%	44%	0.111	0.9	0.76	1.28	-	1	2	100%	0.83
8Y25_GOL_C_301	39%	43%	0.133	0.882	0.87	1.26	-	-	4	100%	0.92
8Y25_GOL_C_303	39%	47%	0.144	0.9	1.03	0.92	-	-	0	100%	0.8
8Y25_GOL_B_301	38%	41%	0.133	0.876	0.81	1.38	-	1	0	100%	0.93
8Y25_GOL_C_302	36%	40%	0.128	0.857	0.88	1.37	-	1	2	100%	0.98
8Y25_GOL_A_301	30%	47%	0.143	0.853	1.06	0.92	-	-	0	100%	1
6UD6_GOL_A_201	98%	46%	0.029	0.992	0.93	1.07	-	-	0	100%	1
2Y3E_GOL_B_1136	98%	82%	0.032	0.996	0.39	0.36	-	-	2	100%	1
6S4Q_GOL_A_404	97%	50%	0.038	0.993	1.13	0.67	1	-	0	100%	0.5
6S50_GOL_A_404	95%	49%	0.039	0.984	0.77	1.06	-	-	1	100%	1
5N89_GOL_D_201	88%	66%	0.053	0.972	0.62	0.5	-	-	0	100%	1
2YGX_GOL_A_1398	100%	61%	0.006	1	0.38	0.93	-	-	2	100%	1
5MR6_GOL_B_602	100%	60%	0.012	0.999	0.4	0.92	-	-	0	100%	1
5WM2_GOL_A_603	100%	86%	0.011	0.999	0.53	0.16	-	-	0	100%	1
5W5T_GOL_D_506	100%	87%	0.014	0.998	0.38	0.26	-	-	0	100%	1
3MG3_GOL_A_324	100%	77%	0.015	0.997	0.24	0.58	-	-	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8Y25 | pdb_00008y25