CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 8VHP designated by the Author
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8VHP_CDP_D_809 | 97% | 49% | 0.051 | 0.974 | 0.89 | 0.96 | - | 2 | 2 | 0 | 100% | 1 |
| 8VHP_CDP_H_808 | 96% | 50% | 0.058 | 0.973 | 0.9 | 0.93 | - | 2 | 2 | 0 | 100% | 1 |
| 8VHP_CDP_A_809 | 95% | 48% | 0.059 | 0.972 | 0.93 | 0.96 | 1 | 1 | 2 | 0 | 100% | 1 |
| 8VHP_CDP_E_809 | 95% | 50% | 0.06 | 0.971 | 0.88 | 0.94 | - | 1 | 2 | 0 | 100% | 1 |
| 8VHP_CDP_G_808 | 93% | 50% | 0.064 | 0.967 | 0.9 | 0.94 | 1 | 1 | 2 | 0 | 100% | 1 |
| 8VHP_CDP_C_809 | 92% | 48% | 0.065 | 0.96 | 0.89 | 1.01 | - | 1 | 2 | 0 | 100% | 1 |
| 8VHP_CDP_B_809 | 91% | 49% | 0.069 | 0.962 | 0.92 | 0.94 | 1 | - | 2 | 0 | 100% | 1 |
| 8VHP_CDP_F_809 | 90% | 48% | 0.07 | 0.958 | 0.9 | 1.01 | 1 | 1 | 4 | 0 | 100% | 1 |
| 5CNS_CDP_A_801 | 92% | 50% | 0.07 | 0.967 | 0.92 | 0.89 | 1 | - | 1 | 0 | 100% | 1 |
| 4FKX_CDP_C_201 | 100% | 57% | 0.023 | 0.995 | 0.8 | 0.73 | - | - | 0 | 0 | 100% | 1 |
| 4WTK_CDP_A_605 | 100% | 43% | 0.03 | 0.996 | 0.96 | 1.13 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2VBU_CDP_A_1133 | 99% | 43% | 0.039 | 0.988 | 0.88 | 1.22 | - | 3 | 0 | 0 | 100% | 1 |
| 6SDK_CDP_C_301 | 99% | 5% | 0.043 | 0.987 | 3.7 | 1.62 | 12 | 7 | 0 | 0 | 100% | 1 |
| 7O0N_CDP_A_301 | 98% | 9% | 0.047 | 0.984 | 3.46 | 1.06 | 17 | 1 | 0 | 0 | 100% | 1 |














