Ligand validation:8GYY

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
8GYY_NAG_A_909	77%	60%	0.066	0.944	0.39	0.95	-	2	0	100%	1
8GYY_NAG_B_908	65%	57%	0.082	0.916	0.4	1.04	-	3	0	100%	1
8GYY_NAG_C_910	63%	61%	0.084	0.912	0.48	0.81	-	-	0	100%	1
8GYY_NAG_A_905	62%	50%	0.084	0.904	0.4	1.35	-	4	0	100%	1
8GYY_NAG_B_913	61%	53%	0.089	0.908	0.43	1.21	-	1	0	100%	1
8GYY_NAG_B_909	57%	57%	0.097	0.905	0.43	1.02	-	-	0	100%	1
8GYY_NAG_A_906	54%	53%	0.094	0.884	0.47	1.15	-	1	0	100%	1
8GYY_NAG_D_908	49%	28%	0.103	0.873	0.83	2.04	1	2	0	100%	1
8GYY_NAG_C_909	45%	58%	0.103	0.853	0.46	0.97	-	1	0	100%	1
8GYY_NAG_C_901	39%	57%	0.131	0.886	0.41	1.06	-	-	8	93%	1
8GYY_NAG_C_902	32%	65%	0.143	0.871	0.43	0.72	-	-	6	93%	1
8GYY_NAG_D_906	30%	53%	0.124	0.816	0.5	1.14	-	3	0	100%	1
8GYY_NAG_D_907	28%	44%	0.114	0.787	0.39	1.66	-	2	1	100%	1
8GYY_NAG_A_910	15%	47%	0.157	0.775	0.44	1.46	-	3	0	100%	1
8GYY_NAG_C_908	13%	59%	0.153	0.75	0.5	0.88	-	-	0	100%	1
8GYY_NAG_B_911	7%	87%	0.152	0.679	0.21	0.42	-	-	4	100%	1
8GYY_NAG_B_914	6%	53%	0.153	0.659	0.38	1.26	-	1	0	100%	1
8GYY_NAG_B_916	5%	66%	0.148	0.647	0.39	0.71	-	1	4	93%	1
8GYY_NAG_D_909	5%	56%	0.141	0.606	0.43	1.08	-	1	0	100%	1
8GYY_NAG_C_911	4%	51%	0.152	0.615	0.41	1.32	-	2	0	100%	1
8GYY_NAG_B_915	1%	80%	0.171	0.442	0.17	0.6	-	-	0	100%	1
7EY2_NAG_D_905	99%	3%	0.029	0.993	2.02	3.69	4	9	0	100%	1
6KJ0_NAG_B_917	82%	45%	0.057	0.949	0.5	1.49	-	1	0	100%	1
6JBS_NAG_C_918	80%	67%	0.061	0.948	0.32	0.76	-	-	0	100%	1
7EY1_NAG_A_901	78%	42%	0.059	0.968	0.93	1.22	1	1	4	87%	1
7YO7_NAG_A_902	73%	31%	0.073	0.936	0.76	1.94	-	4	0	100%	1
2QFR_NAG_B_451	100%	63%	0.013	0.998	0.49	0.72	-	1	0	100%	1
5LDS_NAG_C_1003	100%	65%	0.016	0.997	0.54	0.62	-	-	3	100%	1
7DDF_NAG_B_401	100%	84%	0.016	0.996	0.21	0.49	-	-	0	100%	1
2HQM_NAG_A_1301	100%	61%	0.018	0.996	0.59	0.7	-	-	0	100%	1
3THD_NAG_B_702	100%	48%	0.019	0.995	0.71	1.18	-	-	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8GYY | pdb_00008gyy

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose