Ligand validation:8ECD

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
8ECD_EDO_B_404	71%	66%	0.096	0.967	0.36	0.75	-	-	2	0	100%	0.5
8ECD_EDO_D_907	69%	60%	0.1	0.963	0.41	0.94	-	-	3	0	100%	0.5
8ECD_EDO_C_403	61%	40%	0.099	0.926	0.35	1.85	-	-	3	0	100%	1
8ECD_EDO_A_403	58%	77%	0.122	0.948	0.3	0.52	-	-	2	0	100%	0.5
8ECD_EDO_C_405	41%	62%	0.131	0.881	0.4	0.86	-	-	0	0	100%	1
8ECD_EDO_C_408	35%	95%	0.142	0.869	0.16	0.25	-	-	0	0	100%	1
8ECD_EDO_C_404	34%	23%	0.139	0.862	1.9	1.32	1	-	8	0	100%	1
8ECD_EDO_D_904	34%	65%	0.14	0.862	0.48	0.66	-	-	0	0	100%	1
8ECD_EDO_A_404	31%	91%	0.134	0.839	0.29	0.23	-	-	1	0	100%	1
8ECD_EDO_C_406	31%	49%	0.208	0.963	0.88	0.99	-	-	9	0	100%	0.5
8ECD_EDO_C_407	30%	42%	0.159	0.873	0.95	1.21	-	-	6	0	100%	1
8ECD_EDO_D_905	19%	61%	0.162	0.813	0.78	0.53	-	-	0	0	100%	1
8ECE_EDO_B_403	71%	88%	0.09	0.958	0.22	0.4	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.