Ligand validation:7MFO

TYD: THYMIDINE-5'-DIPHOSPHATE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
7MFO_TYD_B_401	54%	9%	0.109	0.91	1.43	3.01	2	1	1	0	100%	1
7MFO_TYD_D_401	52%	9%	0.114	0.906	1.32	3.08	2	2	0	0	100%	1
7MFO_TYD_E_402	38%	8%	0.138	0.879	1.39	3.16	2	3	10	0	100%	1
7MFO_TYD_H_401	34%	11%	0.131	0.849	1.25	2.9	2	1	0	0	100%	1
7MFO_TYD_E_403	33%	8%	0.135	0.848	1.44	3.1	3	2	10	0	100%	1
7MFO_TYD_C_402	32%	9%	0.13	0.833	1.33	2.99	3	2	3	0	100%	1
7MFO_TYD_J_401	28%	10%	0.142	0.837	1.3	2.89	3	2	1	0	100%	1
7MFO_TYD_B_403	25%	9%	0.149	0.826	1.37	3.05	2	2	10	0	100%	1
7MFO_TYD_I_402	16%	10%	0.153	0.772	1.28	2.98	4	3	3	0	100%	1
7MFO_TYD_G_402	7%	9%	0.177	0.715	1.46	2.98	3	2	0	0	100%	1
3OTI_TYD_A_377	98%	24%	0.035	0.989	1.32	1.78	3	9	0	0	100%	1
3EVO_TYD_A_160	98%	22%	0.036	0.99	1.41	1.81	4	7	0	0	100%	1
5WXK_TYD_A_401	97%	21%	0.037	0.987	1.33	1.94	3	6	0	0	100%	1
1LVW_TYD_A_3002	96%	30%	0.041	0.984	1.78	1.05	4	2	0	0	100%	1
3RYK_TYD_B_182	95%	11%	0.042	0.985	2.35	1.83	4	8	0	0	100%	0.7

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.