6PDL
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 6PDL designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
6PDL_NAG_C_701 | 23% | 65% | 0.251 | 0.872 | 0.68 | 0.66 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
6PDL_NAG_A_701 | 19% | 68% | 0.298 | 0.897 | 0.57 | 0.67 | - | 1 | 0 | 0 | 100% | 0.9333 |
6PDL_NAG_D_201 | 14% | 63% | 0.271 | 0.827 | 0.61 | 0.79 | - | 1 | 1 | 0 | 100% | 0.9333 |
6PDL_NAG_B_201 | 9% | 58% | 0.311 | 0.805 | 0.74 | 0.85 | 1 | 1 | 1 | 0 | 100% | 0.9333 |
6PDL_NAG_E_701 | 9% | 68% | 0.324 | 0.811 | 0.45 | 0.78 | - | - | 1 | 0 | 100% | 0.9333 |
6PDL_NAG_C_702 | 7% | 69% | 0.336 | 0.783 | 0.47 | 0.73 | - | 1 | 0 | 0 | 100% | 0.9333 |
6PDL_NAG_H_201 | 5% | 59% | 0.426 | 0.825 | 0.66 | 0.89 | - | 1 | 1 | 0 | 100% | 0.9333 |
6PDL_NAG_A_702 | 4% | 62% | 0.379 | 0.76 | 0.77 | 0.7 | 1 | - | 0 | 0 | 100% | 0.9333 |
6PDL_NAG_H_202 | 3% | 49% | 0.43 | 0.781 | 1.27 | 0.73 | 2 | - | 3 | 0 | 100% | 0.9333 |
6PDL_NAG_E_702 | 3% | 63% | 0.342 | 0.668 | 0.56 | 0.85 | - | 1 | 0 | 0 | 100% | 0.9333 |
6PDL_NAG_G_701 | 3% | 66% | 0.399 | 0.723 | 0.75 | 0.56 | 1 | - | 0 | 0 | 100% | 0.9333 |
6PDL_NAG_F_201 | 2% | 58% | 0.434 | 0.691 | 0.58 | 1.03 | - | 1 | 0 | 0 | 100% | 0.9333 |
6PDL_NAG_G_702 | 2% | 66% | 0.39 | 0.645 | 0.72 | 0.61 | 1 | - | 0 | 0 | 100% | 0.9333 |
2X9M_NAG_A_1605 | 68% | 60% | 0.138 | 0.949 | 0.55 | 0.96 | - | 1 | 0 | 0 | 100% | 0.9333 |
8JR5_NAG_B_702 | 40% | 72% | 0.149 | 0.86 | 0.39 | 0.7 | - | - | 1 | 0 | 100% | 0.9333 |
6PD4_NAG_A_705 | 29% | 74% | 0.21 | 0.869 | 0.3 | 0.69 | - | 1 | 0 | 0 | 100% | 0.9333 |
8JR3_NAG_F_701 | 6% | 80% | 0.254 | 0.689 | 0.27 | 0.57 | - | - | 0 | 0 | 100% | 0.9333 |
6CMG_NAG_A_703 | 2% | 71% | 0.392 | 0.665 | 0.39 | 0.73 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |