6PDL | pdb_00006pdl


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 6PDL designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6PDL_NAG_D_201 34% 58% 0.103 0.7990.62 0.8 - 110100%1
6PDL_NAG_A_701 19% 62% 0.132 0.7590.58 0.68 - 100100%1
6PDL_NAG_C_701 14% 60% 0.138 0.7280.67 0.67 1 100100%1
6PDL_NAG_H_201 10% 54% 0.134 0.6780.67 0.91 - 110100%1
6PDL_NAG_B_201 8% 54% 0.141 0.6750.72 0.87 1 110100%1
6PDL_NAG_A_702 7% 57% 0.147 0.6590.78 0.69 1 -00100%1
6PDL_NAG_E_701 6% 62% 0.15 0.6450.46 0.8 - 110100%1
6PDL_NAG_E_702 5% 58% 0.152 0.6270.55 0.88 - 100100%1
6PDL_NAG_H_202 4% 45% 0.156 0.6161.33 0.71 2 -30100%1
6PDL_NAG_G_702 3% 61% 0.148 0.57 0.72 0.6 1 -00100%1
6PDL_NAG_C_702 3% 63% 0.141 0.543 0.48 0.75 - 100100%1
6PDL_NAG_F_201 2% 53% 0.155 0.499 0.58 1.06 - 100100%1
6PDL_NAG_G_701 1% 61% 0.183 0.538 0.73 0.58 1 -00100%1
2VSM_NAG_A_1605 59% 49% 0.093 0.9060.6 1.21 - 120100%1
4UF7_NAG_B_1627 52% 53% 0.106 0.8930.46 1.16 - 200100%1
2WO2_NAG_B_1168 2% 12% 0.156 0.54 1.15 2.83 1 621100%1
6P7Y_NAG_A_719 2% 73% 0.15 0.512 0.5 0.43 - -01100%1
2QFR_NAG_B_451 100% 63% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 61% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_B_702 100% 48% 0.019 0.9950.71 1.18 - -00100%1