Ligand validation:6YVN

U5P: URIDINE-5'-MONOPHOSPHATE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6YVN_U5P_A_502	99%	68%	0.026	0.989	0.51	0.54	-	1	2	0	100%	0.28
7OQM_U5P_B_504	100%	70%	0.015	0.999	0.41	0.59	-	-	0	0	100%	1
7OQN_U5P_A_504	100%	69%	0.017	0.998	0.43	0.6	-	-	0	0	100%	1
7OQI_U5P_B_505	100%	68%	0.017	0.998	0.45	0.6	-	-	0	0	100%	0.81
7OQK_U5P_A_505	100%	67%	0.018	0.998	0.48	0.61	-	-	0	0	100%	0.59
3EX3_U5P_B_481	100%	14%	0.018	0.997	1.6	2.16	5	11	0	0	100%	1
2E6Y_U5P_A_301	100%	43%	0.013	0.998	1.29	0.86	3	-	0	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.