GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6XRS designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6XRS_GDP_A_601 | 83% | 42% | 0.114 | 0.974 | 0.95 | 1.28 | 1 | 3 | 0 | 0 | 100% | 1 |
6XRS_GDP_D_601 | 81% | 45% | 0.122 | 0.976 | 1.02 | 1.1 | 1 | 2 | 0 | 0 | 100% | 1 |
6XRS_GDP_C_602 | 74% | 37% | 0.137 | 0.969 | 1 | 1.44 | 1 | 6 | 0 | 0 | 100% | 1 |
6XRS_GDP_B_601 | 68% | 43% | 0.154 | 0.965 | 0.98 | 1.24 | 1 | 3 | 0 | 0 | 100% | 1 |
6XRS_GDP_C_601 | 10% | 37% | 0.358 | 0.869 | 1.03 | 1.44 | 1 | 5 | 3 | 0 | 100% | 0.5 |
6XRS_GDP_B_602 | 7% | 29% | 0.39 | 0.858 | 1.14 | 1.7 | 2 | 9 | 0 | 0 | 100% | 0.5 |
1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
2PHN_GDP_A_2696 | 100% | 44% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |