NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 6PD5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6PD5_NAG_A_1116 | 73% | 53% | 0.141 | 0.969 | 0.46 | 1.35 | - | 4 | 2 | 0 | 100% | 0.9333 |
6PD5_NAG_A_1117 | 32% | 42% | 0.272 | 0.946 | 0.61 | 1.62 | - | 3 | 0 | 0 | 100% | 0.9333 |
6PD5_NAG_A_1115 | 9% | 20% | 0.325 | 0.819 | 0.98 | 2.37 | - | 4 | 0 | 0 | 100% | 0.9333 |
6PD5_NAG_A_1118 | 4% | 8% | 0.284 | 0.659 | 1.39 | 3.13 | 2 | 5 | 0 | 0 | 100% | 0.9333 |
6PCX_NAG_A_1117 | 79% | 57% | 0.115 | 0.962 | 0.37 | 1.24 | - | 2 | 1 | 0 | 100% | 0.9333 |
6NTF_NAG_A_1005 | 57% | 9% | 0.108 | 0.883 | 2.17 | 2.3 | 4 | 4 | 0 | 0 | 100% | 0.9333 |
6A0Z_NAG_A_601 | 54% | 31% | 0.146 | 0.91 | 1.48 | 1.26 | 2 | 2 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |