Ligand validation:6GDO

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
6GDO_NAP_A_301	97%	12%	0.051	0.976	1.92	2.02	12	24	0	100%	0.9
6GDO_NAP_D_301	96%	14%	0.054	0.971	1.63	2.14	12	21	1	100%	0.9
6GDO_NAP_B_301	96%	13%	0.055	0.972	2.03	1.84	14	20	1	100%	0.9
6GDO_NAP_C_301	44%	17%	0.14	0.868	1.69	1.79	9	20	1	100%	0.6
6RX0_NAP_B_301	100%	36%	0.016	0.998	1.07	1.35	4	11	1	100%	1
2X9G_NAP_B_1269	100%	42%	0.02	0.997	1.09	1.05	3	3	0	100%	1
2YHI_NAP_A_1269	100%	17%	0.021	0.996	1.81	1.7	11	13	0	100%	1
4CM3_NAP_B_1269	100%	19%	0.024	0.995	1.33	1.97	8	21	0	100%	1
6GDP_NAP_B_301	100%	24%	0.024	0.995	1.39	1.61	6	15	1	100%	1
2J8T_NAP_A_1316	100%	51%	0.015	0.999	0.88	0.9	2	1	1	100%	1
6IJX_NAP_A_401	100%	58%	0.014	0.998	0.54	0.92	1	3	4	100%	1
8BJL_NAP_A_401	100%	68%	0.013	0.999	0.45	0.62	-	-	1	100%	1
8FH5_NAP_A_401	100%	60%	0.013	0.998	0.72	0.66	1	1	2	100%	1
8G50_NAP_A_202	100%	31%	0.013	0.998	1.42	1.24	5	8	2	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6GDO | pdb_00006gdo