UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6CGI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6CGI_UDP_A_401 | 72% | 74% | 0.112 | 0.936 | 0.38 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
6CGI_UDP_B_401 | 72% | 90% | 0.119 | 0.943 | 0.24 | 0.38 | - | - | 0 | 0 | 100% | 1 |
6CGI_UDP_D_401 | 71% | 70% | 0.118 | 0.94 | 0.48 | 0.67 | - | 1 | 0 | 0 | 100% | 1 |
6CGI_UDP_C_401 | 60% | 70% | 0.137 | 0.922 | 0.49 | 0.65 | - | 1 | 0 | 0 | 100% | 1 |
6EYT_UDP_A_404 | 90% | 83% | 0.089 | 0.973 | 0.29 | 0.49 | - | - | 0 | 0 | 100% | 1 |
6DUS_UDP_A_501 | 81% | 86% | 0.128 | 0.982 | 0.24 | 0.47 | - | - | 2 | 0 | 100% | 1 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_D_702 | 100% | 67% | 0.032 | 0.995 | 0.59 | 0.69 | - | - | 0 | 0 | 100% | 1 |
2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |