Ligand validation:6CFD

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6CFD_MPD_F_401	54%	62%	0.138	0.957	0.49	0.77	-	-	5	0	100%	1
6CFD_MPD_E_401	48%	60%	0.151	0.953	0.65	0.7	-	-	7	0	100%	1
6CFD_MPD_C_401	48%	47%	0.148	0.946	0.83	1.1	-	1	8	0	100%	1
6CFD_MPD_N_401	48%	51%	0.147	0.944	0.76	0.99	-	1	3	0	100%	1
6CFD_MPD_S_401	47%	55%	0.152	0.948	0.75	0.82	-	-	6	0	100%	1
6CFD_MPD_K_401	47%	54%	0.152	0.947	0.68	0.92	-	1	6	0	100%	1
6CFD_MPD_A_401	45%	82%	0.15	0.934	0.51	0.25	-	-	7	0	100%	1
6CFD_MPD_L_401	45%	60%	0.153	0.938	0.55	0.79	-	-	5	0	100%	1
6CFD_MPD_G_401	41%	45%	0.163	0.935	0.68	1.33	-	-	6	0	100%	1
6CFD_MPD_M_401	40%	59%	0.164	0.935	0.41	0.95	-	1	5	0	100%	1
6CFD_MPD_T_401	38%	50%	0.176	0.942	0.84	0.95	-	-	5	0	100%	1
6CFD_MPD_B_401	35%	61%	0.178	0.93	0.51	0.8	-	-	6	0	100%	1
6CFD_MPD_I_401	31%	69%	0.194	0.937	0.48	0.55	-	-	8	0	100%	1
6CFD_MPD_D_401	27%	72%	0.2	0.929	0.47	0.47	-	-	5	0	100%	1
3SGR_MPD_E_26	99%	71%	0.025	0.994	0.38	0.57	-	-	0	0	100%	1
4X91_MPD_C_410	99%	80%	0.027	0.996	0.24	0.54	-	-	1	0	100%	1
4WCW_MPD_D_203	99%	70%	0.026	0.993	0.3	0.69	-	-	4	0	100%	1
2EIW_MPD_B_1530	99%	61%	0.029	0.995	0.37	0.91	-	-	0	0	100%	1
7ZOB_MPD_F_202	99%	68%	0.029	0.995	0.45	0.61	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.