UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5WFG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5WFG_UDP_A_301 | 32% | 86% | 0.223 | 0.897 | 0.3 | 0.42 | - | - | 0 | 0 | 100% | 1 |
| 5WFG_UDP_F_301 | 24% | 70% | 0.236 | 0.863 | 0.54 | 0.62 | - | - | 0 | 0 | 100% | 1 |
| 5WFG_UDP_D_301 | 19% | 70% | 0.237 | 0.835 | 0.43 | 0.7 | - | 1 | 0 | 0 | 100% | 1 |
| 5WFG_UDP_C_301 | 15% | 78% | 0.264 | 0.824 | 0.27 | 0.6 | - | - | 0 | 0 | 100% | 1 |
| 5WFG_UDP_E_301 | 9% | 64% | 0.293 | 0.787 | 0.66 | 0.72 | - | - | 0 | 0 | 100% | 1 |
| 5WFG_UDP_B_301 | 6% | 85% | 0.312 | 0.739 | 0.34 | 0.41 | - | - | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
