PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5Z5C designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5Z5C_PLP_A_401 | 87% | 10% | 0.113 | 0.985 | 2.8 | 1.62 | 4 | 5 | 1 | 0 | 100% | 0.9375 |
5Z5C_PLP_C_401 | 85% | 9% | 0.113 | 0.979 | 3.06 | 1.43 | 3 | 5 | 1 | 0 | 100% | 0.9375 |
5Z5C_PLP_B_401 | 76% | 12% | 0.146 | 0.982 | 2.78 | 1.37 | 3 | 3 | 0 | 0 | 100% | 0.9375 |
5Z5C_PLP_D_401 | 68% | 8% | 0.15 | 0.962 | 3.1 | 1.6 | 3 | 5 | 1 | 0 | 100% | 0.9375 |
5B55_PLP_A_401 | 86% | 27% | 0.107 | 0.977 | 0.91 | 2.02 | - | 5 | 0 | 0 | 100% | 0.4219 |
5B53_PLP_A_401 | 83% | 28% | 0.125 | 0.984 | 1.25 | 1.64 | 1 | 4 | 2 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
1JF9_PLP_A_500 | 100% | 12% | 0.047 | 0.994 | 1.28 | 2.78 | 1 | 11 | 0 | 0 | 100% | 0.9375 |