NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5YKC designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5YKC_NAG_A_602 | 18% | 55% | 0.255 | 0.844 | 0.61 | 1.11 | - | 1 | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_A_605 | 13% | 19% | 0.337 | 0.883 | 1.49 | 1.95 | 3 | 3 | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_A_601 | 12% | 30% | 0.318 | 0.847 | 1.5 | 1.28 | 3 | 2 | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_B_601 | 12% | 72% | 0.302 | 0.829 | 0.57 | 0.5 | - | - | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_B_604 | 11% | 13% | 0.313 | 0.827 | 2.39 | 1.62 | 2 | 3 | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_B_605 | 11% | 77% | 0.318 | 0.832 | 0.47 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_C_602 | 8% | 54% | 0.303 | 0.769 | 0.3 | 1.46 | - | 2 | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_C_601 | 7% | 19% | 0.372 | 0.82 | 1.85 | 1.63 | 3 | 2 | 6 | 0 | 100% | 0.9333 |
5YKC_NAG_C_603 | 5% | 37% | 0.399 | 0.798 | 1.12 | 1.35 | 1 | 2 | 2 | 0 | 100% | 0.9333 |
5YKC_NAG_B_603 | 3% | 73% | 0.467 | 0.819 | 0.51 | 0.52 | - | - | 1 | 0 | 100% | 0.9333 |
5YKC_NAG_C_604 | 3% | 71% | 0.422 | 0.739 | 0.51 | 0.6 | - | - | 0 | 0 | 100% | 0.9333 |
5YKC_NAG_B_602 | 0% | 66% | 0.669 | 0.735 | 0.68 | 0.62 | - | - | 0 | 0 | 100% | 0.9333 |
5YT9_NAG_A_1001 | 25% | 58% | 0.253 | 0.889 | 0.76 | 0.83 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
5YT8_NAG_A_601 | 18% | 69% | 0.27 | 0.862 | 0.56 | 0.65 | - | 1 | 0 | 0 | 100% | 0.9333 |
6KCJ_NAG_A_601 | 8% | 45% | 0.308 | 0.788 | 1.21 | 0.94 | 2 | 1 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |