5YGK | pdb_00005ygk


DST: DIMETHYLALLYL S-THIOLODIPHOSPHATE

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DST is a Ligand Of Interest in 5YGK designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5YGK_DST_H_301 83% 33% 0.064 0.9651.54 1.13 1 -30100%1
5YGK_DST_E_301 82% 14% 0.06 0.9532.63 1.23 5 140100%1
5YGK_DST_G_302 80% 31% 0.072 0.9651.55 1.23 3 240100%1
5YGK_DST_H_302 77% 25% 0.076 0.9611.74 1.35 3 230100%1
5YGK_DST_C_302 75% 11% 0.085 0.9662.87 1.3 5 130100%1
5YGK_DST_A_302 74% 11% 0.082 0.9562.55 1.6 5 220100%1
5YGK_DST_D_302 71% 14% 0.086 0.9512.44 1.4 4 150100%1
5YGK_DST_B_302 70% 13% 0.084 0.9432.36 1.59 4 240100%1
5YGK_DST_E_302 66% 14% 0.088 0.9312.27 1.54 4 150100%1
5YGK_DST_D_301 65% 11% 0.088 0.9262.58 1.64 4 550100%1
5YGK_DST_A_301 64% 13% 0.088 0.9212.96 1.01 5 110100%1
5YGK_DST_G_301 64% 29% 0.091 0.9261.62 1.27 2 150100%1
5YGK_DST_F_302 63% 34% 0.096 0.931.54 1.06 2 130100%1
5YGK_DST_B_301 63% 18% 0.086 0.9132.38 1.11 5 150100%1
5YGK_DST_F_301 59% 16% 0.092 0.9022.34 1.34 4 120100%1
5YGK_DST_C_301 57% 8% 0.101 0.9113 1.66 5 290100%1
9VT9_DST_A_402 98% 27% 0.033 0.9941.15 1.79 1 200100%1
6OS6_DST_A_401 95% 39% 0.045 0.9891.29 1.03 1 100100%1
9VTE_DST_A_301 92% 45% 0.055 0.9891.16 0.89 1 100100%1
9VTC_DST_A_302 90% 47% 0.054 0.981.14 0.84 1 100100%1
5INJ_DST_A_503 90% 28% 0.057 0.9841.82 1.11 2 100100%1