Ligand validation:5YFY

PLG: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]

PLG is a Ligand Of Interest in 5YFY designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5YFY_PLG_B_501	75%	5%	0.128	0.96	2.83	2.51	4	9	0	0	100%	1
5YFY_PLG_A_501	67%	5%	0.149	0.957	2.81	2.57	3	11	0	0	100%	1
5YFY_PLG_C_501	64%	6%	0.142	0.94	2.72	2.31	3	6	0	0	100%	1
5XMT_PLG_C_501	82%	7%	0.122	0.977	2.51	2.3	3	8	0	0	100%	1
5XMR_PLG_A_501	79%	4%	0.115	0.96	2.49	3.07	4	14	2	0	100%	1
5XMQ_PLG_A_501	78%	8%	0.108	0.951	2.43	2.15	3	9	0	0	100%	1
5YG3_PLG_A_501	76%	4%	0.131	0.968	2.59	2.91	4	11	1	0	100%	1
4TN4_PLG_C_501	74%	11%	0.114	0.944	1.15	2.97	1	7	1	0	100%	1
8AQL_PLG_C_601	99%	23%	0.054	0.989	1.28	1.9	3	7	0	0	100%	1
8DSK_PLG_B_902	95%	29%	0.069	0.973	1.24	1.57	1	6	3	0	100%	1
8TQF_PLG_A_501	90%	25%	0.095	0.977	1.44	1.61	3	6	1	0	100%	1
8H20_PLG_A_401	89%	16%	0.091	0.97	1.66	2.01	3	5	0	0	100%	1
1EJI_PLG_A_500	89%	1%	0.082	0.959	4.99	3.42	14	12	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.