Ligand validation:5YDH

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5YDH_EPE_A_812	2%	7%	0.33	0.815	2.03	2.73	1	9	0	100%	1
5YDH_EPE_A_813	2%	8%	0.286	0.719	2	2.67	1	8	0	100%	1
5YDH_EPE_B_818	1%	7%	0.353	0.811	2.02	2.68	1	10	1	100%	1
5X61_EPE_B_810	6%	14%	0.275	0.853	2.52	1.35	2	2	3	100%	1
1VCU_EPE_A_382	100%	23%	0.019	0.999	1.86	1.35	3	2	0	100%	1
1XX1_EPE_D_2004	100%	31%	0.022	0.997	0.79	1.91	1	5	1	100%	1
8EP4_EPE_A_301	100%	38%	0.023	0.994	0.82	1.54	1	2	0	100%	1
4S0W_EPE_A_204	99%	35%	0.024	0.995	0.81	1.68	1	4	0	100%	1
24XI_EPE_F_401	99%	35%	0.025	0.995	0.55	1.91	-	3	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5YDH | pdb_00005ydh