Ligand validation:5YD2

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5YD2_PLP_A_402	81%	7%	0.086	0.942	2.2	2.59	4	6	2	100%	1
5YD2_PLP_B_402	70%	7%	0.112	0.932	2.76	2.03	3	6	1	100%	1
5YB0_PLP_C_401	100%	11%	0.036	0.993	2.55	1.61	3	6	3	100%	1
1WBJ_PLP_B_1392	100%	26%	0.01	0.999	1.31	1.6	1	2	0	100%	1
3L6C_PLP_A_350	100%	26%	0.015	0.999	1.15	1.75	2	6	0	100%	1
5CE8_PLP_A_301	100%	9%	0.013	0.999	3.01	1.47	6	3	1	100%	1
7KMC_PLP_B_401	100%	45%	0.014	0.999	0.93	1.08	1	2	0	100%	1
1ASM_PLP_A_410	100%	15%	0.017	0.998	1.78	1.89	4	6	3	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5YD2 | pdb_00005yd2