AP5: BIS(ADENOSINE)-5'-PENTAPHOSPHATE
AP5 is a Ligand Of Interest in 5YCC designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5YCC_AP5_A_201 | 88% | 7% | 0.058 | 0.977 | 2.89 | 2.04 | 19 | 26 | 3 | 0 | 100% | 1 |
| 5YCC_AP5_B_201 | 87% | 7% | 0.061 | 0.977 | 2.83 | 2.01 | 19 | 22 | 3 | 0 | 100% | 1 |
| 5XRU_AP5_A_201 | 94% | 9% | 0.046 | 0.983 | 1.88 | 2.58 | 16 | 33 | 0 | 0 | 100% | 1 |
| 5X6K_AP5_B_201 | 93% | 7% | 0.049 | 0.983 | 2.16 | 2.55 | 17 | 29 | 0 | 0 | 100% | 1 |
| 5YCB_AP5_B_201 | 89% | 7% | 0.056 | 0.979 | 2.75 | 2.05 | 17 | 25 | 1 | 0 | 100% | 1 |
| 5X6L_AP5_A_201 | 82% | 9% | 0.069 | 0.968 | 2.64 | 1.89 | 17 | 22 | 1 | 0 | 100% | 1 |
| 3X2S_AP5_A_303 | 100% | 18% | 0.02 | 0.997 | 1.66 | 1.8 | 10 | 18 | 10 | 0 | 100% | 1 |
| 3H86_AP5_B_193 | 99% | 19% | 0.028 | 0.992 | 1.51 | 1.86 | 10 | 26 | 8 | 0 | 100% | 1 |
| 4MKF_AP5_B_303 | 98% | 13% | 0.031 | 0.99 | 1.85 | 2.09 | 14 | 30 | 0 | 0 | 100% | 1 |
| 4MKG_AP5_A_303 | 98% | 38% | 0.036 | 0.99 | 1.24 | 1.11 | 7 | 7 | 0 | 0 | 100% | 1 |
| 3AKY_AP5_A_301 | 98% | 9% | 0.035 | 0.988 | 3.03 | 1.52 | 13 | 15 | 0 | 0 | 100% | 1 |














