CDL: CARDIOLIPIN
CDL is a Ligand Of Interest in 5Y5S designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5Y5S_CDL_H_304 | 36% | 41% | 0.137 | 0.918 | 1.04 | 1.16 | 4 | 8 | 4 | 0 | 79% | 1 |
| 5Y5S_CDL_K_104 | 28% | 41% | 0.154 | 0.888 | 1 | 1.19 | 4 | 9 | 5 | 0 | 86% | 1 |
| 5Y5S_CDL_M_416 | 20% | 35% | 0.132 | 0.911 | 1.32 | 1.2 | 3 | 3 | 1 | 0 | 39% | 1 |
| 5Y5S_CDL_H_302 | 19% | 37% | 0.151 | 0.878 | 1.09 | 1.35 | 4 | 9 | 5 | 0 | 64% | 1 |
| 5Y5S_CDL_Q_105 | 13% | 40% | 0.174 | 0.84 | 1.09 | 1.15 | 4 | 8 | 5 | 0 | 75% | 1 |
| 5Y5S_CDL_Y_104 | 7% | 70% | 0.14 | 0.859 | 0.48 | 0.51 | - | - | 0 | 0 | 13% | 1 |
| 5Y5S_CDL_S_104 | 7% | 36% | 0.163 | 0.772 | 1.11 | 1.35 | 5 | 8 | 12 | 0 | 62% | 1 |
| 5Y5S_CDL_D_104 | 2% | 31% | 0.186 | 0.74 | 1.45 | 1.32 | 4 | 7 | 3 | 0 | 40% | 1 |
| 5Y5S_CDL_Y_103 | 1% | 32% | 0.17 | 0.656 | 1.48 | 1.22 | 4 | 4 | 1 | 0 | 40% | 1 |
| 7C52_CDL_M_406 | 46% | 44% | 0.118 | 0.886 | 0.93 | 1.15 | 4 | 8 | 7 | 0 | 100% | 1 |
| 5X1B_CDL_C_303 | 50% | 32% | 0.101 | 0.878 | 1.47 | 1.23 | 12 | 7 | 3 | 0 | 100% | 1 |
| 9GCX_CDL_C_504 | 47% | 62% | 0.143 | 0.934 | 0.44 | 0.8 | - | 2 | 16 | 0 | 100% | 1 |
| 4D6T_CDL_T_501 | 47% | 34% | 0.093 | 0.969 | 1.41 | 1.21 | 4 | 5 | 1 | 0 | 49% | 1 |
| 6NKN_CDL_C_304 | 47% | 50% | 0.108 | 0.874 | 0.98 | 0.82 | 4 | 4 | 24 | 0 | 100% | 1 |
| 4D6U_CDL_G_501 | 46% | 28% | 0.081 | 0.955 | 1.51 | 1.42 | 4 | 6 | 0 | 0 | 44% | 1 |
