5Y3K | pdb_00005y3k


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 5Y3K designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5Y3K_NAG_A_1009 79% 58% 0.064 0.950.31 1.08 - 110100%1
5Y3K_NAG_B_1009 74% 52% 0.071 0.940.52 1.16 - 200100%1
5Y3K_NAG_A_1004 68% 32% 0.074 0.9150.54 2.11 - 400100%1
5Y3K_NAG_A_1008 64% 54% 0.085 0.9170.45 1.13 - -00100%1
5Y3K_NAG_B_1008 62% 60% 0.083 0.9050.32 1.01 - 100100%1
5Y3K_NAG_B_1004 61% 41% 0.083 0.8980.43 1.73 - 300100%1
5Y3K_NAG_B_1003 59% 47% 0.084 0.8920.47 1.45 - 100100%1
5Y3K_NAG_A_1006 50% 53% 0.097 0.8680.49 1.15 - 100100%1
5Y3K_NAG_B_1006 48% 50% 0.103 0.8710.76 1.04 1 -00100%1
5Y3K_NAG_A_1007 46% 45% 0.103 0.8590.53 1.48 - 300100%1
5Y3K_NAG_A_1005 44% 63% 0.092 0.8290.37 0.85 - -00100%1
5Y3K_NAG_B_1007 42% 45% 0.105 0.8450.54 1.47 - 300100%1
5Y3K_NAG_A_1003 34% 39% 0.101 0.7970.52 1.75 - 500100%1
5Y3K_NAG_B_1005 34% 44% 0.096 0.7880.66 1.38 - 200100%1
5Y3K_NAG_B_1010 17% 35% 0.127 0.7410.78 1.73 - 200100%1
5Y3L_NAG_A_1008 86% 47% 0.054 0.960.44 1.46 - 400100%1
3WPD_NAG_A_907 81% 51% 0.061 0.9520.54 1.2 - 100100%1
5Y3J_NAG_B_1009 79% 41% 0.065 0.9490.55 1.62 - 400100%1
3WPC_NAG_B_902 68% 45% 0.082 0.9320.71 1.3 1 200100%1
3WPB_NAG_A_902 66% 27% 0.085 0.9260.42 2.45 - 310100%1
2QFR_NAG_B_451 100% 63% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 61% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_B_702 100% 48% 0.019 0.9950.71 1.18 - -00100%1