PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 5XDX designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5XDX_PGV_N_607 | 62% | 51% | 0.113 | 0.954 | 0.9 | 0.87 | 2 | 2 | 4 | 0 | 100% | 1 |
| 5XDX_PGV_A_607 | 62% | 50% | 0.114 | 0.954 | 0.89 | 0.93 | 2 | 3 | 2 | 0 | 100% | 1 |
| 5XDX_PGV_P_303 | 59% | 51% | 0.122 | 0.956 | 0.9 | 0.84 | 2 | 3 | 3 | 0 | 100% | 1 |
| 5XDX_PGV_C_305 | 57% | 52% | 0.128 | 0.954 | 0.86 | 0.82 | 2 | 1 | 4 | 0 | 100% | 1 |
| 5XDX_PGV_M_101 | 7% | 46% | 0.235 | 0.812 | 0.98 | 1.01 | 2 | 3 | 3 | 0 | 100% | 1 |
| 5XDX_PGV_C_306 | 5% | 48% | 0.24 | 0.774 | 0.96 | 0.97 | 2 | 2 | 1 | 0 | 100% | 1 |
| 5XDX_PGV_N_606 | 4% | 47% | 0.257 | 0.797 | 0.97 | 0.98 | 2 | 2 | 3 | 0 | 100% | 1 |
| 5XDX_PGV_P_304 | 2% | 48% | 0.27 | 0.747 | 0.98 | 0.94 | 2 | 2 | 1 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 93% | 49% | 0.047 | 0.982 | 0.92 | 0.94 | 2 | 5 | 0 | 0 | 100% | 1 |
| 6NKN_PGV_A_607 | 93% | 41% | 0.046 | 0.98 | 0.85 | 1.36 | 2 | 5 | 0 | 0 | 100% | 1 |
| 3ASN_PGV_A_522 | 87% | 45% | 0.061 | 0.977 | 0.86 | 1.18 | 2 | 2 | 1 | 0 | 100% | 1 |
| 6NMF_PGV_A_606 | 87% | 49% | 0.061 | 0.975 | 0.93 | 0.92 | 2 | 3 | 0 | 0 | 100% | 1 |
| 9IKG_PGV_A_614 | 83% | 49% | 0.073 | 0.982 | 0.75 | 1.07 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5X1F_PGV_A_608 | 82% | 39% | 0.074 | 0.977 | 0.89 | 1.43 | 3 | 7 | 0 | 0 | 100% | 1 |














