5WDU | pdb_00005wdu


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 5WDU designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5WDU_NAG_A_701 63% 64% 0.075 0.8970.64 0.56 1 -00100%1
5WDU_NAG_F_650 63% 68% 0.071 0.8860.33 0.72 - 110100%1
5WDU_NAG_J_701 58% 63% 0.074 0.870.63 0.59 1 -00100%1
5WDU_NAG_F_649 57% 12% 0.06 0.841.62 2.36 3 800100%1
5WDU_NAG_F_615 50% 86% 0.06 0.8080.17 0.5 - -20100%1
5WDU_NAG_A_702 50% 65% 0.079 0.8380.64 0.53 1 -00100%1
5WDU_NAG_R_702 47% 60% 0.069 0.8090.75 0.59 1 -00100%1
5WDU_NAG_Q_650 46% 77% 0.096 0.8480.26 0.56 - -10100%1
5WDU_NAG_G_652 45% 91% 0.104 0.8560.18 0.35 - -00100%1
5WDU_NAG_R_701 43% 61% 0.11 0.8560.78 0.54 1 -00100%1
5WDU_NAG_R_703 42% 58% 0.082 0.8070.66 0.77 - -20100%1
5WDU_NAG_G_650 39% 70% 0.143 0.8910.3 0.68 - 110100%1
5WDU_NAG_Q_615 38% 85% 0.069 0.7640.19 0.5 - -10100%1
5WDU_NAG_G_649 37% 12% 0.066 0.7531.73 2.3 2 800100%1
5WDU_NAG_Q_633 35% 87% 0.086 0.7790.21 0.42 - -00100%1
5WDU_NAG_Q_653 35% 50% 0.105 0.811.06 0.76 1 160100%1
5WDU_NAG_G_615 34% 47% 0.064 0.7330.99 0.95 1 140100%1
5WDU_NAG_Q_649 27% 66% 0.122 0.7930.35 0.75 - 100100%1
5WDU_NAG_A_703 26% 58% 0.125 0.7940.62 0.79 - -10100%1
5WDU_NAG_F_652 23% 90% 0.169 0.8530.19 0.37 - -00100%1
5WDU_NAG_Q_606 19% 69% 0.104 0.7170.44 0.57 - -30100%1
5WDU_NAG_G_606 12% 69% 0.07 0.5950.46 0.57 - -30100%1
5WDU_NAG_G_633 10% 87% 0.101 0.6260.25 0.4 - -00100%1
5WDU_NAG_Q_651 9% 12% 0.169 0.7342 2.08 1 600100%1
5WDU_NAG_G_653 8% 71% 0.087 0.57 0.49 0.48 - -30100%1
5WDU_NAG_Q_652 7% 90% 0.114 0.6110.18 0.37 - -00100%1
5WDU_NAG_F_633 6% 87% 0.142 0.6320.23 0.41 - -00100%1
5WDU_NAG_F_653 5% 59% 0.094 0.533 0.81 0.59 1 -60100%1
5WDU_NAG_J_702 4% 58% 0.082 0.492 0.88 0.57 1 -00100%1
5WDU_NAG_F_651 3% 88% 0.155 0.5940.23 0.38 - -00100%1
5WDU_NAG_F_606 3% 69% 0.114 0.5 0.45 0.57 - -30100%1
5WDU_NAG_G_651 1% 75% 0.207 0.533 0.34 0.53 - -00100%1
5WDU_NAG_J_703 1% 56% 0.237 0.557 0.68 0.81 1 -20100%1
5U7O_NAG_B_704 99% 86% 0.024 0.9890.23 0.44 - -00100%1
6NNF_NAG_G_638 99% 86% 0.027 0.990.21 0.46 - -00100%1
5UTY_NAG_G_644 98% 71% 0.027 0.9820.37 0.58 - -00100%1
5V7J_NAG_G_1663 96% 68% 0.039 0.9860.47 0.59 - -10100%1
5UTF_NAG_B_703 95% 75% 0.04 0.9810.45 0.42 - -10100%1
2QFR_NAG_B_451 100% 63% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 61% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_B_702 100% 48% 0.019 0.9950.71 1.18 - -00100%1