TYD: THYMIDINE-5'-DIPHOSPHATE
TYD is a Ligand Of Interest in 5UIJ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5UIJ_TYD_B_401 | 79% | 19% | 0.066 | 0.952 | 1.34 | 2.03 | 2 | 9 | 1 | 0 | 100% | 1 |
| 5UIJ_TYD_B_402 | 75% | 15% | 0.073 | 0.948 | 1.47 | 2.22 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5UIJ_TYD_A_401 | 70% | 13% | 0.077 | 0.933 | 1.26 | 2.64 | 3 | 15 | 1 | 0 | 100% | 1 |
| 5UIJ_TYD_A_402 | 58% | 17% | 0.095 | 0.903 | 1.36 | 2.12 | 3 | 11 | 0 | 0 | 100% | 1 |
| 5UIM_TYD_B_403 | 74% | 25% | 0.074 | 0.942 | 1.31 | 1.73 | 4 | 9 | 0 | 0 | 100% | 1 |
| 5UIN_TYD_B_402 | 68% | 19% | 0.082 | 0.931 | 1.36 | 2.01 | 5 | 9 | 2 | 0 | 100% | 1 |
| 3OTI_TYD_A_377 | 98% | 24% | 0.035 | 0.989 | 1.32 | 1.78 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3EVO_TYD_A_160 | 98% | 22% | 0.036 | 0.99 | 1.41 | 1.81 | 4 | 7 | 0 | 0 | 100% | 1 |
| 5WXK_TYD_A_401 | 97% | 21% | 0.037 | 0.987 | 1.33 | 1.94 | 3 | 6 | 0 | 0 | 100% | 1 |
| 1LVW_TYD_A_3002 | 96% | 30% | 0.041 | 0.984 | 1.78 | 1.05 | 4 | 2 | 0 | 0 | 100% | 1 |
| 3RYK_TYD_B_182 | 96% | 11% | 0.042 | 0.985 | 2.35 | 1.83 | 4 | 8 | 0 | 0 | 100% | 0.7 |














