UDP: URIDINE-5'-DIPHOSPHATE

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UDP is a Ligand Of Interest in 5TVG designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5TVG_UDP_D_501 78% 66% 0.076 0.9620.62 0.52 1 -00100%1
5TVG_UDP_A_501 78% 60% 0.079 0.9670.5 0.85 - 100100%1
5TVG_UDP_F_501 73% 73% 0.084 0.9570.45 0.47 - -00100%1
5TVG_UDP_B_501 71% 77% 0.09 0.9580.4 0.44 - -10100%1
5TVG_UDP_G_501 70% 63% 0.084 0.9420.59 0.64 1 100100%1
5TVG_UDP_C_501 69% 66% 0.09 0.9490.5 0.63 - 110100%1
5TVG_UDP_E_501 66% 61% 0.094 0.9420.64 0.69 - 100100%1
5TVG_UDP_H_501 48% 61% 0.121 0.9020.62 0.69 - 100100%1
5F87_UDP_A_501 100% 31% 0.013 0.9991.18 1.54 2 420100%1
5V0T_UDP_B_501 100% 68% 0.014 0.9990.43 0.61 - 100100%1
7FGA_UDP_D_401 100% 2% 0.014 0.9993.6 2.79 15 1220100%1
8X3Q_UDP_D_401 100% 3% 0.013 0.9993.5 2.77 14 1400100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.51 2.73 14 1220100%1