Ligand validation:5PHF

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5PHF_EDO_A_405	78%	79%	0.073	0.958	0.38	0.42	-	-	0	0	100%	1
5PHF_EDO_A_404	76%	87%	0.077	0.958	0.39	0.25	-	-	0	0	100%	0.92
5PHF_EDO_A_410	58%	74%	0.103	0.918	0.44	0.45	-	-	0	0	100%	0.81
5PHF_EDO_A_412	54%	80%	0.104	0.901	0.41	0.37	-	-	0	0	100%	0.41
5PHF_EDO_A_409	50%	78%	0.128	0.922	0.42	0.39	-	-	2	0	100%	0.71
5PHF_EDO_A_408	46%	69%	0.118	0.887	0.39	0.64	-	-	0	0	100%	0.8
5PHF_EDO_A_407	44%	78%	0.127	0.889	0.41	0.4	-	-	1	0	100%	0.9
5PHF_EDO_A_411	40%	75%	0.132	0.881	0.41	0.46	-	-	0	0	100%	1
5PHF_EDO_A_406	34%	92%	0.163	0.9	0.45	0.07	-	-	2	0	100%	0.81
5PH8_EDO_A_404	82%	84%	0.07	0.97	0.37	0.34	-	-	0	0	100%	0.9
5PH2_EDO_A_408	82%	71%	0.063	0.957	0.41	0.55	-	-	0	0	100%	0.79
6ETS_EDO_A_405	82%	76%	0.066	0.962	0.71	0.16	-	-	0	0	100%	1
6ETG_EDO_A_404	80%	73%	0.068	0.96	0.66	0.26	-	-	0	0	100%	1
5PHG_EDO_A_404	80%	87%	0.07	0.962	0.38	0.28	-	-	0	0	100%	0.91
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.