Ligand validation:5PH7

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5PH7_EDO_A_404	67%	86%	0.091	0.941	0.41	0.26	-	-	0	0	100%	1
5PH7_EDO_A_405	53%	78%	0.107	0.899	0.4	0.41	-	-	0	0	100%	1
5PH7_EDO_A_409	51%	80%	0.115	0.903	0.39	0.39	-	-	0	0	100%	1
5PH7_EDO_A_407	37%	71%	0.132	0.864	0.4	0.56	-	-	0	0	100%	1
5PH7_EDO_A_408	30%	85%	0.142	0.845	0.43	0.26	-	-	3	0	100%	1
5PH7_EDO_A_406	14%	73%	0.183	0.81	0.39	0.53	-	-	1	0	100%	1
5PH7_EDO_A_410	1%	75%	0.314	0.669	0.41	0.46	-	-	0	0	100%	1
5PH8_EDO_A_404	82%	84%	0.07	0.97	0.37	0.34	-	-	0	0	100%	0.9
5PH2_EDO_A_408	82%	71%	0.063	0.957	0.41	0.55	-	-	0	0	100%	0.79
6ETS_EDO_A_405	82%	76%	0.066	0.962	0.71	0.16	-	-	0	0	100%	1
6ETG_EDO_A_404	80%	73%	0.068	0.96	0.66	0.26	-	-	0	0	100%	1
5PHG_EDO_A_404	80%	87%	0.07	0.962	0.38	0.28	-	-	0	0	100%	0.91
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.