SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5OY0 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5OY0_SQD_L_5002 | 23% | 52% | 0.159 | 0.836 | 0.8 | 0.89 | - | 3 | 7 | 0 | 100% | 1 |
| 5OY0_SQD_L_5001 | 19% | 51% | 0.159 | 0.817 | 0.8 | 0.93 | - | 4 | 8 | 0 | 94% | 1 |
| 5OY0_SQD_B_5008 | 10% | 52% | 0.17 | 0.742 | 0.8 | 0.91 | - | 3 | 8 | 0 | 100% | 1 |
| 5OY0_SQD_f_5001 | 9% | 52% | 0.174 | 0.739 | 0.79 | 0.9 | - | 2 | 9 | 0 | 100% | 1 |
| 5OY0_SQD_0_5005 | 4% | 52% | 0.185 | 0.668 | 0.8 | 0.89 | - | 3 | 3 | 0 | 100% | 1 |
| 5OY0_SQD_b_5006 | 3% | 52% | 0.179 | 0.605 | 0.79 | 0.9 | - | 3 | 7 | 0 | 100% | 1 |
| 5OY0_SQD_F_5001 | 1% | 51% | 0.221 | 0.559 | 0.8 | 0.92 | - | 2 | 5 | 0 | 100% | 1 |
| 6HQB_SQD_F_5001 | 2% | 52% | 0.262 | 0.722 | 0.79 | 0.92 | - | 2 | 4 | 0 | 100% | 1 |
| 5V2C_SQD_A_612 | 85% | 23% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 79% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 2 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 78% | 29% | 0.065 | 0.945 | 0.97 | 1.86 | 3 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 74% | 28% | 0.081 | 0.955 | 0.94 | 1.94 | 3 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 73% | 30% | 0.084 | 0.954 | 0.94 | 1.81 | 3 | 13 | 8 | 0 | 100% | 1 |