5NXR | pdb_00005nxr


LDA: LAURYL DIMETHYLAMINE-N-OXIDE

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LDA is a Ligand Of Interest in 5NXR designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NXR_LDA_B_404 54% 45% 0.106 0.9061.12 0.93 1 -10100%1
5NXR_LDA_C_401 49% 52% 0.126 0.9131.07 0.65 2 -10100%1
5NXR_LDA_A_402 49% 46% 0.118 0.8981.09 0.92 2 -00100%1
5NXR_LDA_C_403 47% 57% 0.117 0.8880.88 0.6 - -00100%1
5NXR_LDA_B_413 47% 53% 0.121 0.8930.96 0.69 1 -10100%1
5NXR_LDA_C_407 45% 57% 0.134 0.9050.84 0.64 - -00100%1
5NXR_LDA_B_409 41% 54% 0.123 0.870.88 0.72 - 100100%1
5NXR_LDA_B_406 35% 11% 0.139 0.8670.91 3.18 - 300100%1
5NXR_LDA_C_414 35% 54% 0.148 0.8820.98 0.63 2 -10100%1
5NXR_LDA_A_410 34% 51% 0.126 0.8380.95 0.81 1 110100%1
5NXR_LDA_B_415 34% 55% 0.116 0.821.04 0.52 2 -00100%1
5NXR_LDA_B_403 33% 57% 0.134 0.8491.04 0.46 1 -20100%1
5NXR_LDA_B_408 31% 55% 0.111 0.8420.99 0.57 1 -0081%1
5NXR_LDA_B_414 30% 9% 0.141 0.8460.73 3.65 - 310100%1
5NXR_LDA_A_403 28% 55% 0.16 0.8670.94 0.64 1 -20100%1
5NXR_LDA_B_405 27% 53% 0.146 0.8330.97 0.71 1 -30100%1
5NXR_LDA_B_401 25% 53% 0.153 0.8361.03 0.62 2 -00100%1
5NXR_LDA_C_408 25% 12% 0.149 0.8270.87 3.08 1 320100%1
5NXR_LDA_B_416 25% 58% 0.141 0.8130.92 0.53 1 -10100%1
5NXR_LDA_C_415 24% 55% 0.146 0.820.93 0.65 - -10100%1
5NXR_LDA_C_406 24% 56% 0.153 0.830.92 0.62 1 -10100%1
5NXR_LDA_C_429 16% 63% 0.174 0.8270.8 0.46 1 -1094%1
5NXR_LDA_C_413 16% 55% 0.165 0.7920.83 0.73 - 120100%1
5NXR_LDA_C_425 15% 51% 0.162 0.7851.02 0.75 2 110100%1
5NXR_LDA_C_417 15% 50% 0.171 0.80.84 0.94 - 130100%1
5NXR_LDA_A_405 15% 51% 0.188 0.8240.72 1.01 - 100100%1
5NXR_LDA_C_405 15% 42% 0.147 0.7961.22 0.94 1 12081%1
5NXR_LDA_C_411 14% 52% 0.147 0.7511.09 0.64 2 -00100%1
5NXR_LDA_C_427 13% 52% 0.14 0.7710.98 0.72 1 -0081%1
5NXR_LDA_C_422 11% 12% 0.143 0.7090.77 3.21 - 300100%1
5NXR_LDA_A_401 10% 52% 0.182 0.7691.02 0.67 1 -00100%1
5NXR_LDA_C_404 10% 51% 0.161 0.7321.05 0.74 1 100100%1
5NXR_LDA_C_430 10% 56% 0.137 0.6840.94 0.61 - -00100%1
5NXR_LDA_C_439 9% 7% 0.159 0.790.86 3.83 - 30069%1
5NXR_LDA_B_402 9% 57% 0.196 0.7771.07 0.41 2 -10100%0.5
5NXR_LDA_C_402 9% 45% 0.171 0.8161.15 0.88 1 10063%1
5NXR_LDA_B_411 8% 54% 0.171 0.721.17 0.45 2 -20100%0.5
5NXR_LDA_C_418 7% 52% 0.179 0.721.16 0.57 1 -00100%1
5NXR_LDA_A_413 7% 8% 0.156 0.7510.97 3.62 - 32069%1
5NXR_LDA_B_412 7% 47% 0.143 0.6550.86 1.11 - 100100%1
5NXR_LDA_A_404 7% 49% 0.172 0.7611.13 0.73 1 -0075%1
5NXR_LDA_C_426 7% 49% 0.203 0.7521.06 0.81 2 -10100%1
5NXR_LDA_C_416 6% 48% 0.2 0.8150.98 0.95 - -2063%1
5NXR_LDA_C_437 5% 49% 0.172 0.7671.25 0.62 1 -0056%1
5NXR_LDA_A_406 5% 11% 0.162 0.6430.81 3.28 - 310100%1
5NXR_LDA_C_431 5% 53% 0.163 0.6410.84 0.82 - 100100%1
5NXR_LDA_B_417 4% 9% 0.19 0.6720.96 3.39 1 310100%1
5NXR_LDA_A_412 4% 2% 0.209 0.8131.32 5.09 1 32050%1
5NXR_LDA_C_441 3% 74% 0.139 0.660.5 0.39 - -0056%1
5NXR_LDA_C_412 3% 50% 0.202 0.6451 0.83 1 120100%1
5NXR_LDA_C_419 3% 52% 0.144 0.543 0.82 0.87 - 130100%1
5NXR_LDA_C_423 2% 54% 0.182 0.6011 0.64 1 -00100%1
5NXR_LDA_C_410 2% 50% 0.148 0.6061.24 0.61 2 -2069%1
5NXR_LDA_A_411 2% 50% 0.235 0.6770.67 1.12 - 100100%1
5NXR_LDA_C_433 2% 72% 0.181 0.6420.44 0.49 - -0069%0.5
5NXR_LDA_C_428 2% 11% 0.177 0.558 0.89 3.23 - 300100%1
5NXR_LDA_B_407 2% 10% 0.242 0.6580.93 3.29 1 300100%0.5
5NXR_LDA_C_420 2% 45% 0.176 0.542 1.34 0.72 2 -30100%1
5NXR_LDA_A_407 2% 7% 0.238 0.6831.01 3.63 - 30081%1
5NXR_LDA_C_409 1% 55% 0.194 0.554 0.96 0.61 1 -00100%1
5NXR_LDA_C_438 1% 7% 0.179 0.5980.97 3.67 - 30069%1
5NXR_LDA_A_408 1% 46% 0.163 0.551 1.21 0.79 2 -1075%1
5NXR_LDA_C_421 1% 52% 0.209 0.544 1 0.73 2 -00100%1
5NXR_LDA_B_410 1% 47% 0.271 0.6461.25 0.71 1 -00100%0.5
5NXR_LDA_C_436 1% 72% 0.164 0.5 0.5 0.44 - -0075%1
5NXR_LDA_C_435 1% 12% 0.175 0.443 0.84 3.12 - 300100%1
5NXR_LDA_C_440 1% 74% 0.208 0.5940.56 0.34 - -0056%1
5NXR_LDA_A_409 1% 57% 0.166 0.506 1.03 0.45 - -2063%1
5NXR_LDA_C_432 1% 57% 0.183 0.423 0.89 0.6 1 -10100%1
5NXR_LDA_C_434 0% 74% 0.246 0.503 0.45 0.45 - -0063%0.5
5NXR_LDA_C_442 0% 75% 0.202 0.414 0.63 0.26 - -0056%1
5NXR_LDA_C_424 0% 49% 0.167 0.208 1.01 0.84 - -0056%1
5NXU_LDA_B_401 46% 11% 0.156 0.9471.15 2.99 2 310100%1
1OJD_LDA_H_601 98% 25% 0.039 0.9962.21 0.92 2 -40100%1
2VQI_LDA_B_1639 97% 27% 0.041 0.9952.49 0.52 2 -30100%1
1T1L_LDA_A_428 90% 17% 0.064 0.9931.9 1.63 1 380100%1
6PRC_LDA_H_701 88% 24% 0.047 0.9592.52 0.69 2 -00100%1
2R4N_LDA_B_502 88% 18% 0.065 0.9882.11 1.41 2 3120100%1