MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
MGD is a Ligand Of Interest in 5NQD designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5NQD_MGD_A_2001 | 97% | 26% | 0.037 | 0.989 | 1.5 | 1.48 | 7 | 9 | 0 | 0 | 100% | 1 |
| 5NQD_MGD_G_2001 | 97% | 25% | 0.038 | 0.987 | 1.37 | 1.69 | 5 | 12 | 2 | 0 | 100% | 1 |
| 5NQD_MGD_A_2002 | 96% | 22% | 0.04 | 0.987 | 1.48 | 1.75 | 6 | 11 | 1 | 0 | 100% | 1 |
| 5NQD_MGD_C_2001 | 96% | 18% | 0.041 | 0.986 | 1.49 | 1.96 | 8 | 17 | 0 | 0 | 100% | 1 |
| 5NQD_MGD_G_2002 | 96% | 20% | 0.041 | 0.986 | 1.67 | 1.67 | 9 | 10 | 0 | 0 | 100% | 1 |
| 5NQD_MGD_C_2002 | 96% | 17% | 0.042 | 0.986 | 1.75 | 1.75 | 10 | 12 | 1 | 0 | 100% | 1 |
| 5NQD_MGD_E_2001 | 95% | 18% | 0.042 | 0.984 | 1.61 | 1.81 | 7 | 11 | 1 | 0 | 100% | 1 |
| 5NQD_MGD_E_2002 | 95% | 23% | 0.044 | 0.985 | 1.31 | 1.85 | 7 | 14 | 0 | 0 | 100% | 1 |
| 8R3A_MGD_A_912 | 99% | 51% | 0.026 | 0.994 | 0.81 | 0.95 | 2 | 3 | 2 | 0 | 100% | 1 |
| 8CCQ_MGD_A_2002 | 99% | 23% | 0.029 | 0.993 | 1.53 | 1.62 | 6 | 8 | 1 | 0 | 100% | 1 |
| 8ED4_MGD_E_2002 | 92% | 50% | 0.05 | 0.982 | 0.59 | 1.17 | - | 5 | 0 | 0 | 100% | 1 |
| 4AAY_MGD_C_2002 | 84% | 21% | 0.071 | 0.979 | 1.44 | 1.83 | 8 | 11 | 1 | 0 | 100% | 1 |
| 8CM5_MGD_A_1105 | 100% | 49% | 0.017 | 0.998 | 0.75 | 1.09 | 1 | 4 | 1 | 0 | 100% | 1 |
| 5E7O_MGD_G_1003 | 100% | 2% | 0.021 | 0.997 | 5.18 | 1.97 | 30 | 19 | 3 | 0 | 100% | 1 |
| 7Z5O_MGD_AAA_1101 | 99% | 54% | 0.027 | 0.994 | 0.64 | 0.96 | - | 3 | 1 | 0 | 100% | 1 |
| 8CM6_MGD_A_1103 | 99% | 49% | 0.028 | 0.993 | 0.8 | 1.06 | 1 | 5 | 1 | 0 | 100% | 1 |