Ligand validation:5NHD

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5NHD_XYS_D_504	63%	46%	0.087	0.913	0.89	1.1	-	-	0	100%	1
5NHD_XYS_D_505	56%	53%	0.095	0.893	0.84	0.79	-	-	0	100%	1
5NHD_XYS_C_504	52%	51%	0.099	0.882	0.98	0.78	-	-	0	100%	1
5NHD_XYS_A_505	44%	40%	0.111	0.865	1.1	1.16	1	2	0	100%	1
5NHD_XYS_B_507	31%	55%	0.128	0.826	0.42	1.12	-	1	0	100%	1
5NHE_XYS_D_504	70%	48%	0.075	0.929	0.94	0.98	-	1	1	100%	1
6T8E_XYS_C_505	66%	37%	0.08	0.919	1.11	1.3	1	2	0	100%	1
5NH7_XYS_C_505	64%	50%	0.082	0.913	0.84	0.95	-	-	1	100%	1
6T8F_XYS_C_505	63%	36%	0.085	0.914	1.22	1.24	1	-	0	100%	1
1W9T_XYS_B_1146	98%	42%	0.033	0.988	0.79	1.34	-	1	3	100%	0.5
2CDC_XYS_D_1371	97%	51%	0.037	0.984	0.87	0.89	1	-	0	100%	1
8OZ1_XYS_A_804	95%	58%	0.031	0.99	0.82	0.62	-	-	0	90%	1
7PLC_XYS_C_302	80%	62%	0.061	0.949	0.55	0.7	-	-	1	100%	1
8BQA_XYS_AAA_402	77%	36%	0.059	0.955	0.8	1.66	-	2	0	90%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5NHD | pdb_00005nhd