DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 5MX2 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5MX2_DGD_c_516 | 66% | 46% | 0.085 | 0.941 | 0.84 | 1.14 | 3 | 6 | 6 | 0 | 94% | 1 |
| 5MX2_DGD_C_517 | 63% | 44% | 0.092 | 0.937 | 0.84 | 1.23 | 2 | 7 | 4 | 0 | 94% | 1 |
| 5MX2_DGD_C_519 | 62% | 47% | 0.088 | 0.926 | 0.83 | 1.1 | 3 | 7 | 1 | 0 | 94% | 1 |
| 5MX2_DGD_c_518 | 61% | 48% | 0.093 | 0.928 | 0.85 | 1.04 | 3 | 2 | 4 | 0 | 94% | 1 |
| 5MX2_DGD_H_103 | 59% | 45% | 0.09 | 0.922 | 0.84 | 1.2 | 2 | 5 | 4 | 0 | 91% | 1 |
| 5MX2_DGD_c_517 | 57% | 46% | 0.087 | 0.926 | 0.89 | 1.1 | 2 | 4 | 9 | 0 | 83% | 1 |
| 5MX2_DGD_h_102 | 51% | 49% | 0.103 | 0.897 | 0.82 | 1.01 | 2 | 3 | 8 | 0 | 94% | 1 |
| 5MX2_DGD_C_518 | 51% | 43% | 0.096 | 0.906 | 0.86 | 1.27 | 2 | 9 | 3 | 0 | 85% | 1 |
| 5V2C_DGD_C_516 | 91% | 41% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 86% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 85% | 48% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 8IRF_DGD_C_517 | 81% | 45% | 0.06 | 0.963 | 0.84 | 1.2 | 2 | 6 | 1 | 0 | 94% | 0.5 |
| 3WU2_DGD_C_518 | 80% | 43% | 0.063 | 0.965 | 0.79 | 1.31 | 3 | 9 | 0 | 0 | 94% | 1 |
| 7M76_DGD_L_207 | 93% | 41% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 1PPR_DGD_O_625 | 82% | 51% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
