DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 5L8R designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5L8R_DGD_J_1106 | 54% | 44% | 0.107 | 0.934 | 1.02 | 1.06 | 4 | 4 | 9 | 0 | 88% | 1 |
| 5L8R_DGD_B_854 | 35% | 44% | 0.157 | 0.913 | 1.09 | 1.01 | 5 | 3 | 9 | 0 | 92% | 1 |
| 5L8R_DGD_4_319 | 28% | 40% | 0.157 | 0.913 | 0.8 | 1.42 | 2 | 9 | 7 | 0 | 77% | 1 |
| 5L8R_DGD_G_207 | 3% | 52% | 0.219 | 0.764 | 0.62 | 1.07 | 1 | 4 | 1 | 0 | 71% | 1 |
| 5L8R_DGD_B_801 | 0% | 50% | 0.237 | 0.564 | 0.62 | 1.17 | - | 6 | 7 | 0 | 62% | 1 |
| 6ZXS_DGD_J_1106 | 40% | 38% | 0.132 | 0.909 | 1.16 | 1.21 | 6 | 5 | 5 | 0 | 88% | 1 |
| 7DKZ_DGD_B_850 | 38% | 33% | 0.143 | 0.889 | 1.13 | 1.48 | 5 | 11 | 8 | 0 | 100% | 1 |
| 4Y28_DGD_B_7101 | 37% | 40% | 0.148 | 0.91 | 0.91 | 1.32 | 1 | 11 | 4 | 0 | 92% | 1 |
| 4RKU_DGD_B_7101 | 31% | 40% | 0.149 | 0.878 | 0.88 | 1.36 | 1 | 10 | 4 | 0 | 92% | 1 |
| 7M76_DGD_L_207 | 93% | 41% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 5V2C_DGD_C_516 | 91% | 41% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 86% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 85% | 48% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 1PPR_DGD_O_625 | 82% | 51% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
