Ligand validation:5KYM

DD9: nonane

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KYM_DD9_A_304	47%	66%	0.159	0.959	0.34	0.76	-	-	0	0	100%	1
5KYM_DD9_B_305	34%	69%	0.185	0.938	0.44	0.58	-	-	1	0	100%	1
6GAH_DD9_A_312	96%	71%	0.036	0.977	0.12	0.82	-	-	0	0	100%	1
6GAG_DD9_A_312	95%	71%	0.038	0.974	0.12	0.82	-	-	0	0	100%	1
6GAE_DD9_A_312	92%	71%	0.043	0.968	0.12	0.82	-	-	2	0	100%	1
6GAB_DD9_A_312	92%	71%	0.044	0.969	0.12	0.82	-	-	0	0	100%	1
6GA9_DD9_A_312	91%	71%	0.045	0.968	0.12	0.82	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.