6Y2: ~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide
6Y2 is a Ligand Of Interest in 5KXD designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5KXD_6Y2_B_305 | 74% | 20% | 0.077 | 0.949 | 2.2 | 1.2 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5KXD_6Y2_D_307 | 68% | 12% | 0.084 | 0.934 | 2.91 | 1.19 | 4 | 4 | 0 | 0 | 100% | 1 |
| 5KXD_6Y2_C_312 | 57% | 12% | 0.111 | 0.927 | 3.01 | 1.09 | 7 | 3 | 0 | 0 | 100% | 1 |
| 5KXD_6Y2_A_306 | 50% | 15% | 0.125 | 0.917 | 2.67 | 1.1 | 5 | 6 | 0 | 0 | 100% | 1 |
| 5KXC_6Y2_B_302 | 76% | 20% | 0.071 | 0.949 | 2.1 | 1.25 | 4 | 7 | 0 | 0 | 100% | 1 |
| 5KXE_6Y2_C_303 | 62% | 15% | 0.104 | 0.94 | 2.52 | 1.25 | 3 | 7 | 0 | 0 | 100% | 1 |
