Ligand validation:5KGD

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KGD_EDO_A_403	68%	73%	0.085	0.944	0.55	0.38	-	-	0	0	100%	1
5KGD_EDO_A_407	50%	79%	0.107	0.896	0.52	0.29	-	-	0	0	100%	1
5KGD_EDO_A_406	48%	73%	0.111	0.894	0.5	0.41	-	-	0	0	100%	1
5KGD_EDO_A_416	44%	82%	0.127	0.898	0.49	0.27	-	-	1	0	100%	1
5KGD_EDO_A_414	26%	74%	0.18	0.89	0.5	0.39	-	-	0	0	100%	1
5KGD_EDO_A_409	25%	86%	0.181	0.891	0.56	0.12	-	-	0	0	100%	1
5KGD_EDO_A_411	24%	76%	0.16	0.849	0.5	0.35	-	-	0	0	100%	1
5KGD_EDO_A_402	23%	70%	0.18	0.876	0.39	0.6	-	-	2	0	100%	1
5KGD_EDO_A_415	22%	76%	0.139	0.8	0.52	0.34	-	-	0	0	100%	1
5KGD_EDO_A_417	19%	80%	0.178	0.842	0.53	0.27	-	-	1	0	100%	1
5KGD_EDO_A_419	17%	84%	0.141	0.764	0.55	0.18	-	-	0	0	100%	1
5KGD_EDO_A_408	13%	73%	0.187	0.811	0.47	0.45	-	-	0	0	100%	1
5KGD_EDO_A_404	12%	68%	0.25	0.903	0.39	0.67	-	-	0	0	100%	1
5KGD_EDO_A_401	12%	71%	0.208	0.831	0.38	0.57	-	-	0	0	100%	1
5KGD_EDO_A_410	7%	73%	0.162	0.699	0.51	0.42	-	-	0	0	100%	1
5KGD_EDO_A_405	7%	74%	0.25	0.832	0.66	0.25	-	-	0	0	100%	1
5KGD_EDO_A_412	5%	76%	0.262	0.813	0.47	0.39	-	-	0	0	100%	1
5KGD_EDO_A_418	5%	71%	0.275	0.835	0.41	0.55	-	-	3	0	100%	1
5KGD_EDO_A_413	4%	67%	0.219	0.732	0.4	0.67	-	-	0	0	100%	1
7OOV_EDO_A_404	73%	99%	0.087	0.97	0.14	0.11	-	-	0	0	100%	1
8R0W_EDO_A_401	70%	91%	0.084	0.953	0.39	0.15	-	-	1	0	100%	1
5KGG_EDO_A_403	66%	72%	0.086	0.938	0.44	0.51	-	-	0	0	100%	1
4DTK_EDO_A_401	64%	78%	0.097	0.946	0.51	0.31	-	-	0	0	100%	1
7OOW_EDO_A_402	60%	99%	0.109	0.948	0.13	0.12	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	80%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
5IU0_EDO_A_505	100%	87%	0.015	0.998	0.44	0.22	-	-	0	0	100%	1
5VRB_EDO_A_701	100%	68%	0.015	0.998	0.39	0.66	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	63%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.