5KAG | pdb_00005kag


YE1: [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE

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YE1 is a Ligand Of Interest in 5KAG designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5KAG_YE1_G_501 99% 18% 0.028 0.9932.18 1.29 11 950100%1
5KAG_YE1_F_501 99% 22% 0.029 0.9941.92 1.32 10 1090100%1
5KAG_YE1_C_501 99% 24% 0.029 0.9931.9 1.27 11 1020100%1
5KAG_YE1_H_501 99% 21% 0.03 0.9942.06 1.27 13 840100%1
5KAG_YE1_K_501 99% 24% 0.031 0.9931.84 1.3 12 1220100%1
5KAG_YE1_L_501 99% 21% 0.031 0.9931.9 1.42 10 1410100%1
5KAG_YE1_A_501 99% 15% 0.031 0.9932.41 1.3 11 910100%1
5KAG_YE1_D_501 99% 20% 0.031 0.9932.15 1.23 12 1020100%1
5KAG_YE1_B_501 99% 21% 0.032 0.9941.93 1.37 14 910100%1
5KAG_YE1_E_501 99% 24% 0.032 0.9931.88 1.28 10 940100%1
5KAG_YE1_I_501 98% 22% 0.033 0.9932.01 1.27 12 930100%1
5KAG_YE1_J_501 97% 18% 0.039 0.9912.27 1.23 12 860100%1
4YLH_YE1_G_502 99% 9% 0.028 0.9942.87 1.55 23 18 30100%1
5KAH_YE1_F_501 98% 20% 0.033 0.9932.05 1.33 12 1260100%1
2NP9_YE1_B_999 47% 12% 0.13 0.9121.99 2.07 11 13120100%1
2PG8_YE1_C_999 33% 12% 0.147 0.8691.98 2.09 11 11160100%1