SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5KAF designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5KAF_SQD_B_626 | 20% | 34% | 0.148 | 0.799 | 0.95 | 1.6 | 3 | 12 | 9 | 0 | 100% | 1 |
| 5KAF_SQD_b_601 | 17% | 38% | 0.159 | 0.798 | 0.96 | 1.39 | 3 | 9 | 1 | 0 | 100% | 1 |
| 5KAF_SQD_A_603 | 17% | 35% | 0.174 | 0.83 | 0.97 | 1.53 | 3 | 11 | 2 | 0 | 96% | 1 |
| 5KAF_SQD_f_101 | 12% | 33% | 0.17 | 0.822 | 1.07 | 1.58 | 3 | 11 | 0 | 0 | 80% | 1 |
| 5KAF_SQD_D_408 | 12% | 31% | 0.164 | 0.791 | 1.01 | 1.72 | 2 | 11 | 1 | 0 | 87% | 1 |
| 5KAF_SQD_c_501 | 11% | 37% | 0.191 | 0.799 | 0.95 | 1.45 | 3 | 9 | 2 | 0 | 100% | 1 |
| 5KAF_SQD_I_101 | 6% | 44% | 0.178 | 0.764 | 0.87 | 1.2 | 2 | 2 | 0 | 0 | 74% | 1 |
| 5KAF_SQD_D_409 | 6% | 33% | 0.188 | 0.767 | 1.07 | 1.56 | 3 | 10 | 0 | 0 | 80% | 1 |
| 5KAF_SQD_A_619 | 4% | 44% | 0.202 | 0.766 | 0.89 | 1.18 | 2 | 2 | 3 | 0 | 74% | 1 |
| 5V2C_SQD_A_612 | 84% | 23% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 77% | 30% | 0.066 | 0.95 | 0.93 | 1.82 | 2 | 12 | 2 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 76% | 30% | 0.065 | 0.945 | 0.92 | 1.84 | 2 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 72% | 30% | 0.081 | 0.955 | 0.87 | 1.91 | 2 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 71% | 32% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 8 | 0 | 100% | 1 |
| 6JLJ_SQD_a_414 | 69% | 36% | 0.081 | 0.944 | 0.92 | 1.56 | 2 | 13 | 2 | 0 | 100% | 1 |














