PDG: N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID

PDG is a Ligand Of Interest in 5K8B designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5K8B_PDG_A_501 83% 9% 0.119 0.9772 2.51 4 1160100%1
5K8B_PDG_D_501 78% 9% 0.13 0.9731.98 2.49 4 1070100%1
5K8B_PDG_B_501 73% 7% 0.126 0.9532.71 2.16 10 860100%1
5K8B_PDG_C_501 70% 9% 0.153 0.9721.94 2.5 3 1270100%1
1X2A_PDG_B_1413 88% 3% 0.101 0.9782.35 4 9 19 00100%1
4CE5_PDG_B_1181 85% 23% 0.109 0.9751.79 1.37 4 410100%0.67
2GMU_PDG_A_500 73% 8% 0.146 0.9741.73 2.91 8 1111100%1
8VR5_PDG_B_401 65% 52% 0.154 0.9550.84 1.02 - 110100%1