Ligand validation:5JW4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5JW4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5JW4_NAG_G_402	58%	52%	0.06	0.845	0.4	1.29	-	2	0	0	100%	1
5JW4_NAG_E_404	52%	26%	0.073	0.84	1.48	1.56	1	5	0	0	100%	1
5JW4_NAG_I_402	40%	49%	0.092	0.81	0.28	1.52	-	4	0	0	100%	1
5JW4_NAG_E_403	37%	48%	0.09	0.792	0.44	1.45	-	3	0	0	100%	1
5JW4_NAG_C_402	37%	44%	0.093	0.797	0.4	1.63	-	2	0	0	100%	1
5JW4_NAG_A_402	37%	46%	0.093	0.796	0.49	1.48	-	4	0	0	100%	1
5JW4_NAG_A_403	33%	56%	0.081	0.759	0.32	1.17	-	2	0	0	100%	1
5JW4_NAG_K_404	26%	51%	0.079	0.715	0.85	0.91	1	-	0	0	100%	1
5JW4_NAG_C_401	21%	37%	0.105	0.732	0.42	1.94	-	5	2	0	100%	1
5JW4_NAG_K_401	17%	11%	0.091	0.674	0.83	3.19	1	8	4	0	100%	1
5JW4_NAG_G_401	14%	28%	0.09	0.648	0.75	2.12	1	7	2	0	100%	1
5JW4_NAG_G_403	11%	66%	0.108	0.651	0.4	0.71	-	-	0	0	100%	1
5JW4_NAG_C_403	10%	65%	0.098	0.623	0.31	0.82	-	-	0	0	100%	1
5JW4_NAG_A_401	8%	33%	0.103	0.603	0.79	1.79	1	4	2	0	100%	1
5JW4_NAG_I_401	6%	21%	0.098	0.56	1.01	2.21	1	5	2	0	100%	1
5JW4_NAG_I_403	5%	59%	0.123	0.588	0.3	1.05	-	1	0	0	100%	1
5JW4_NAG_L_201	4%	47%	0.139	0.577	0.39	1.51	-	3	0	1	100%	1
5JW4_NAG_K_403	3%	44%	0.121	0.511	0.4	1.64	-	3	0	0	100%	1
5JW4_NAG_D_201	2%	35%	0.148	0.51	0.4	2.09	-	5	0	1	100%	1
5JW4_NAG_K_402	1%	8%	0.113	0.433	1.55	3.07	2	3	5	0	93%	1
4K62_NAG_A_601	98%	49%	0.035	0.993	0.59	1.23	-	2	1	0	100%	1
3ZNK_NAG_A_1165	98%	42%	0.035	0.992	0.75	1.38	-	2	0	1	100%	1
4K67_NAG_E_601	98%	53%	0.036	0.992	0.55	1.1	-	1	0	0	100%	1
4K65_NAG_C_601	98%	54%	0.031	0.981	0.47	1.1	-	1	0	0	100%	1
3ZNM_NAG_A_1323	97%	41%	0.035	0.987	0.66	1.53	-	3	0	0	100%	1
2QFR_NAG_B_451	100%	63%	0.013	0.998	0.49	0.72	-	1	0	0	100%	1
5LDS_NAG_C_1003	100%	65%	0.016	0.997	0.54	0.62	-	-	3	0	100%	1
7DDF_NAG_B_401	100%	84%	0.016	0.996	0.21	0.49	-	-	0	0	100%	1
2HQM_NAG_A_1301	100%	61%	0.018	0.996	0.59	0.7	-	-	0	0	100%	1
3THD_NAG_B_702	100%	48%	0.019	0.995	0.71	1.18	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5JW4 | pdb_00005jw4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5JW4 designated by the RCSB