GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5IQF designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5IQF_GDP_D_500 | 99% | 22% | 0.04 | 0.989 | 1.39 | 1.75 | 3 | 7 | 0 | 0 | 100% | 1 |
| 5IQF_GDP_C_500 | 98% | 24% | 0.046 | 0.982 | 1.32 | 1.7 | 4 | 10 | 0 | 0 | 100% | 1 |
| 5IQF_GDP_A_500 | 98% | 23% | 0.048 | 0.98 | 1.26 | 1.82 | 3 | 10 | 0 | 0 | 100% | 1 |
| 5IQF_GDP_B_500 | 97% | 21% | 0.051 | 0.974 | 1.27 | 1.9 | 3 | 11 | 0 | 0 | 100% | 1 |
| 5IQG_GDP_D_500 | 100% | 62% | 0.03 | 0.995 | 0.68 | 0.62 | 1 | 1 | 1 | 0 | 100% | 1 |
| 4ORK_GDP_B_500 | 97% | 26% | 0.053 | 0.974 | 1.15 | 1.74 | 2 | 6 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
