GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5IN4 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5IN4_GDP_D_403 | 80% | 30% | 0.064 | 0.957 | 1.13 | 1.63 | 2 | 5 | 0 | 0 | 100% | 1 |
| 5IN4_GDP_C_1002 | 78% | 34% | 0.066 | 0.953 | 1.1 | 1.49 | 2 | 5 | 0 | 0 | 100% | 1 |
| 5IN4_GDP_B_403 | 64% | 28% | 0.085 | 0.928 | 1.24 | 1.66 | 4 | 6 | 0 | 0 | 100% | 1 |
| 5IN4_GDP_A_1002 | 64% | 29% | 0.088 | 0.931 | 1.16 | 1.69 | 3 | 6 | 0 | 0 | 100% | 1 |
| 5IN5_GDP_A_1002 | 97% | 26% | 0.033 | 0.985 | 1.15 | 1.87 | 4 | 8 | 0 | 0 | 100% | 1 |
| 1T2A_GDP_D_1302 | 81% | 54% | 0.062 | 0.96 | 0.82 | 0.79 | 1 | 2 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 34% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 6EG8_GDP_L_401 | 100% | 28% | 0.013 | 0.999 | 1.16 | 1.75 | 3 | 7 | 3 | 0 | 100% | 1 |
| 2CNW_GDP_F_1001 | 100% | 25% | 0.014 | 0.999 | 1.21 | 1.86 | 4 | 8 | 0 | 0 | 100% | 1 |
| 5V9L_GDP_B_201 | 100% | 35% | 0.013 | 0.998 | 0.98 | 1.53 | 1 | 7 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 28% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
