UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 5I0J designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5I0J_UMP_B_201 | 94% | 8% | 0.078 | 0.979 | 3.57 | 1.22 | 12 | 3 | 0 | 0 | 100% | 1 |
5I0J_UMP_A_201 | 93% | 6% | 0.085 | 0.978 | 3.6 | 1.48 | 11 | 4 | 0 | 0 | 100% | 1 |
5HX1_UMP_B_201 | 94% | 7% | 0.076 | 0.977 | 3.66 | 1.31 | 11 | 4 | 0 | 0 | 100% | 1 |
5HZZ_UMP_C_201 | 94% | 6% | 0.079 | 0.978 | 3.54 | 1.47 | 12 | 4 | 0 | 0 | 100% | 1 |
5I0M_UMP_A_201 | 92% | 7% | 0.092 | 0.985 | 3.68 | 1.29 | 13 | 5 | 0 | 0 | 100% | 1 |
2YFD_UMP_A_1147 | 90% | 11% | 0.095 | 0.976 | 2.15 | 2.09 | 5 | 9 | 0 | 0 | 100% | 1 |
2YFC_UMP_C_1144 | 84% | 10% | 0.115 | 0.978 | 2.14 | 2.2 | 5 | 8 | 0 | 0 | 100% | 1 |
3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |